Tools- Text-mining

Last updated: 2021 Jun 28
Total row(s): 06
Sub-Categories/Data type
SciSight is a system for exploratory search of COVID19 related literature to extract and build network of biomedical terms and their evolution over time. Intuitive heirarchical visualization help in understanding novel interactions.
Text-mining tool, Visualize the network of scientists working on COVID-19, Search and discover key facets, Visuvalize the network between proteins/genes/cells concepts, Visuvalize the network of top diseases/chemicals
Tom Hope, Jason Portenoy, Kishore Vasan, Jonathan Borchardt, Eric Horvitz, Daniel S. Weld, Marti A. Hearst, Jevin West
SciSight: Combining faceted navigation and research group detection for COVID-19 exploratory scientific search
SciFact is a model with dataset of 1.4K expert-written scientific claims paired with evidence-containing abstracts annotated with labels and rationales. Scifact verify claims related to COVID-19 by identifying evidence from the CORD-19 corpus..
Text-mining tool, scientific claim verification related to COVID-19
David Wadden, Shanchuan Lin, Kyle Lo, Lucy Lu Wang, Madeleine van Zuylen, Arman Cohan, Hannaneh Hajishirzi
Fact or Fiction: Verifying Scientific Claims
SPIKE-CORD is a powerful text-mining tool for extractive search over CORD-19 ( COVID-19 open research dataset) data. The tool performs the extractive search on words, phrases, and sentences by boolean, sequential, and structured queries.
Text-mining on CORD-19 data
Matthew Hutson
Artificial-intelligence tools aim to tame the coronavirus literature
Boa for COVID-19 can help with solving the COVID-19 problem by analyzing text for COVID-19 papers. The query allows user to extract papers related to specific topic or keywords.
Database, Text mining tool
Robert Dyer, Hoan Anh Nguyen, Hridesh Rajan, and Tien N. Nguyen
Boa: A Language and Infrastructure for Analyzing Ultra-Large-Scale Software Repositories
Tool Covid Triage is built on the modern technologies MongoDB and Elasticsearch, provided by SIBiLS (Swiss Institute of Bioinformatics Literature Services). This tool helps to retrieve MEDLINE and PubMed Central Open Access using keywords or mapped biomedical entities. The literature triage articles are updated daily.
Database, Text mining tool
Julien Gobeill, Deborah Caucheteur, Pierre-Andre Michel, Luc Mottin, Emilie Pasche, and Patrick Ruch
SIB Literature Services: RESTful customizable search engines in biomedical literature, enriched with automatically mapped biomedical concepts
AVOBMAT (Analysis and Visualization of Bibliographic Metadata and Texts) is a text and data mining tool that performs text analysis by analyzing and visualizing bibliographic metadata and texts on COVID-19 Open Research Dataset.
Text and Data Mining tools, Visualization
University of Szeged, Corvinus University of Budapest, and Hungarian Academy of Sciences
Research COVID-19 with AVOBMAT