Sequence, Others


Last updated: 2021 Aug 6
Total hit(s): 3
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Original Article
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Whole-genome sequencing for 2 S gene target failure (SGTF) samples showed that the S deletion 21765-21770 was present in 100% of the reads. It also leads to the removal of 2 amino acids (H69/V70) in the N-terminal domain of the S1 subunit of the S protein.
33478625
(Euro Surveill)
PMID
33478625
Date of Publishing: 2021 Jan
Title Two-step strategy for the identification of SARS-CoV-2 variant of concern 202012/01 and other variants with spike deletion H69V70, France, August to December 2020
Author(s) nameBal A, Destras G et al.
Journal Euro Surveill
Impact factor
7.37
Citation count: 1
Date of Entry 2021 Aug 6


Primers and probes for multiplex RT-qPCR assay that helps in determining the N gene mutations associated with the Alpha variant (B.1.1.7 variant). The reverse primer and the probe were based on the CDC N1 reaction (https://www.cdc.gov/coronavirus/2019-ncov/lab/rt-pcr-panel-primer-probes.html),
Pre-print (medRXiv)
Date of Publishing 2021 May 22
Title Rapid and high throughput RT-qPCR assay for identification and differentiation between SARS-CoV-2 variants B.1.1.7 and B.1.351.
Impact factor
N/A
Date of Entry 2021 Jul 2


Primers and probes for multiplex RT-qPCR assay that helps in determining the spike protein mutations associated with the Beta variant (B.1.351 variant).
Pre-print (medRXiv)
Date of Publishing 2021 May 22
Title Rapid and high throughput RT-qPCR assay for identification and differentiation between SARS-CoV-2 variants B.1.1.7 and B.1.351.
Impact factor
N/A
Date of Entry 2021 Jul 2