Primers and Probes


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Key Findings
Primer and Probe sequence specific for N gene of SARS-CoV-2 used in wastewater RT- ddPCR assay.
PMID
Title Redesigning SARS-CoV-2 clinical RT-qPCR assays for wastewater RT-ddPCR
Author(s) name-
Journal
Impact factor
Citation count
Date of publishing-
Primer and Probe sequence specific for E gene of SARS-CoV-2 used in wastewater RT- ddPCR assay.
PMID
Title Redesigning SARS-CoV-2 clinical RT-qPCR assays for wastewater RT-ddPCR
Author(s) name-
Journal
Impact factor
Citation count
Date of publishing-
Outer primer pairs for an RT-LAMP Cas12a assay specific for the N gene of SARS-CoV-2.
PMID 33238709
Title Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR technology
Author(s) namePang B, Xu J, Liu Y, Peng H, Feng W, Cao Y, Wu J, Xiao H, Pabbaraju K, Tipples G, Joyce MA, Saffran HA, Tyrrell DL, Zhang H, Le XC.
Journal Anal Chem
Impact factor6.37
Citation count1
Date of publishing2020 Dec 15
Inner primer pairs (FIP, BIP) for an RT-LAMP Cas12a assay specific for the N gene of SARS-CoV-2.
PMID 33238709
Title Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR technology
Author(s) namePang B, Xu J, Liu Y, Peng H, Feng W, Cao Y, Wu J, Xiao H, Pabbaraju K, Tipples G, Joyce MA, Saffran HA, Tyrrell DL, Zhang H, Le XC.
Journal Anal Chem
Impact factor6.37
Citation count1
Date of publishing2020 Dec 15
Loop primer pairs (LF and LB) for an RT-LAMP Cas12a assay specific for the N gene of SARS-CoV-2.
PMID 33238709
Title Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR technology
Author(s) namePang B, Xu J, Liu Y, Peng H, Feng W, Cao Y, Wu J, Xiao H, Pabbaraju K, Tipples G, Joyce MA, Saffran HA, Tyrrell DL, Zhang H, Le XC.
Journal Anal Chem
Impact factor6.37
Citation count1
Date of publishing2020 Dec 15
Outer primer pairs for an RT-LAMP Cas12a assay specific for the E gene of SARS-CoV-2.
PMID 33238709
Title Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR technology
Author(s) namePang B, Xu J, Liu Y, Peng H, Feng W, Cao Y, Wu J, Xiao H, Pabbaraju K, Tipples G, Joyce MA, Saffran HA, Tyrrell DL, Zhang H, Le XC.
Journal Anal Chem
Impact factor6.37
Citation count1
Date of publishing2020 Dec 15
Inner primer pairs (FIP, BIP) for an RT-LAMP Cas12a assay specific for the E gene of SARS-CoV-2
PMID 33238709
Title Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR technology
Author(s) namePang B, Xu J, Liu Y, Peng H, Feng W, Cao Y, Wu J, Xiao H, Pabbaraju K, Tipples G, Joyce MA, Saffran HA, Tyrrell DL, Zhang H, Le XC.
Journal Anal Chem
Impact factor6.37
Citation count1
Date of publishing2020 Dec 15
Loop primer pairs (LF and LB) for an RT-LAMP Cas12a assay specific for the E gene of SARS-CoV-2.
PMID 33238709
Title Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR technology
Author(s) namePang B, Xu J, Liu Y, Peng H, Feng W, Cao Y, Wu J, Xiao H, Pabbaraju K, Tipples G, Joyce MA, Saffran HA, Tyrrell DL, Zhang H, Le XC.
Journal Anal Chem
Impact factor6.37
Citation count1
Date of publishing2020 Dec 15
Reporter labeled with fluorophore and quencher specific for the purpose of fluorescence detection carried out by Cas12a-mediated RT-LAMP assay.
PMID 33238709
Title Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR technology
Author(s) namePang B, Xu J, Liu Y, Peng H, Feng W, Cao Y, Wu J, Xiao H, Pabbaraju K, Tipples G, Joyce MA, Saffran HA, Tyrrell DL, Zhang H, Le XC.
Journal Anal Chem
Impact factor6.37
Citation count1
Date of publishing2020 Dec 15
Sequences of the DNA probes used in the HC-FIA assay specific for binding with the N region of the SARS-CoV-2 genome.
PMID 33273714
Title Rapid lateral flow immunoassay for the fluorescence detection of SARS-CoV-2 RNA
Author(s) nameWang D, He S, Wang X, Yan Y, Liu J, Wu S, Liu S, Lei Y, Chen M, Li L, Zhang J, Zhang L, Hu X, Zheng X, Bai J, Zhang Y, Zhang Y, Song M, Tang Y.
Journal Nat Biomed Eng
Impact factor
Citation count3
Date of publishing2020 Dec
Sequences of the DNA probes used in the HC-FIA assay specific for binding with the ORF1ab region of the SARS-CoV-2 genome.
PMID 33273714
Title Rapid lateral flow immunoassay for the fluorescence detection of SARS-CoV-2 RNA
Author(s) nameWang D, He S, Wang X, Yan Y, Liu J, Wu S, Liu S, Lei Y, Chen M, Li L, Zhang J, Zhang L, Hu X, Zheng X, Bai J, Zhang Y, Zhang Y, Song M, Tang Y.
Journal Nat Biomed Eng
Impact factor
Citation count3
Date of publishing2020 Dec
The eight specific primer sequences used in RT-LAMP assay for the detection of SARS-CoV-2.
PMID 33098286
Title A sensitive reverse transcription loop mediated isothermal amplification assay for direct visual detection of SARS-CoV-2
Author(s) nameLau YL, Ismail IB, Izati Binti Mustapa N, Lai MY, Tuan Soh TS, Hassan AH, Peariasamy KM, Lee YL, Goh PP.
Journal Am J Trop Med Hyg
Impact factor2.25
Citation count1
Date of publishing2020 Dec
Sequences of the DNA probes used in the HC-FIA assay specific for binding with the E region of the SARS-CoV-2 genome.
PMID 33273714
Title Rapid lateral flow immunoassay for the fluorescence detection of SARS-CoV-2 RNA
Author(s) nameWang D, He S, Wang X, Yan Y, Liu J, Wu S, Liu S, Lei Y, Chen M, Li L, Zhang J, Zhang L, Hu X, Zheng X, Bai J, Zhang Y, Zhang Y, Song M, Tang Y.
Journal Nat Biomed Eng
Impact factor
Citation count3
Date of publishing2020 Dec
Primers sequence specific for the RdRp gene used in RT-LAMP assay to detect SARS-CoV-2.
PMID 33165486
Title Colorimetric reverse transcription loop-mediated isothermal amplification (RT-LAMP) as a visual diagnostic platform for the detection of the emerging coronavirus SARS-CoV-2
Author(s) nameNawattanapaiboon K , Pasomsub E , Prombun P , Wongbunmak A , Jenjitwanich A , Mahasupachai P , Vetcho P , Chayrach C , Manatjaroenlap N , Samphaongern C , Watthanachockchai T , Leedorkmai P , Manopwisedjaroen S , Akkarawongsapat R , Thitithanyanont A , Phanchana M , Panbangred W , Chauvatcharin S , Srikhirin T .
Journal Analyst
Impact factor3.98
Citation count1
Date of publishing2020 Nov 9
Probe for a real-time RT-PCR test specific for the nsp1 gene of SARS-CoV-2.
PMID 32501535
Title Identification of nsp1 gene as the target of SARS-CoV-2 real time RT-PCR using nanopore whole genome sequencing
Author(s) nameChan WM, Ip JD, Chu AW, Yip CC, Lo LS, Chan KH, Ng AC, Poon RW, To WK, Tsang OT, Leung WS, Kwan MY, Chua GT, Chung TW, Hung IF, Kok KH, Cheng VC, Chan JF, Yuen KY, To KK.
Journal J Med Virol
Impact factor2.07
Citation count5
Date of publishing2020 Nov
Primer pairs for a real-time RT-PCR test specific for the nsp1 gene of SARS-CoV-2.
PMID 32501535
Title Identification of nsp1 gene as the target of SARS-CoV-2 real time RT-PCR using nanopore whole genome sequencing
Author(s) nameChan WM, Ip JD, Chu AW, Yip CC, Lo LS, Chan KH, Ng AC, Poon RW, To WK, Tsang OT, Leung WS, Kwan MY, Chua GT, Chung TW, Hung IF, Kok KH, Cheng VC, Chan JF, Yuen KY, To KK.
Journal J Med Virol
Impact factor2.07
Citation count5
Date of publishing2020 Nov
Primer pairs, for a real-time RT-RAA assay, specific for the N gene of SARS CoV2.
PMID 32758712
Title A reverse-transcription recombinase-aided amplification assay for the rapid detection of N gene of severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)
Author(s) nameWu T, Ge Y, Zhao K, Zhu X, Chen Y, Wu B, Zhu F, Zhu B, Cui L.
Journal Virology
Impact factor2.819
Citation count4
Date of publishing2020 Oct
The second set of primer and probe sequences (YCH-N2) based on the Nucleocapsid gene developed by YCH (Yamanashi Central Hospital), used in real-time RT-PCR assay.
PMID 32650037
Title Double-quencher probes improve detection sensitivity toward Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in a reverse-transcription polymerase chain reaction (RT-PCR) assay
Author(s) nameHirotsu Y, Mochizuki H, Omata M.
Journal J Virol Methods
Impact factor1.76
Citation count9
Date of publishing2020 Oct
The first set of primer and probe sequences (YCH-N1) based on the Nucleocapsid gene developed by YCH (Yamanashi Central Hospital), used in real-time RT-PCR assay.
PMID 32650037
Title Double-quencher probes improve detection sensitivity toward Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in a reverse-transcription polymerase chain reaction (RT-PCR) assay
Author(s) nameHirotsu Y, Mochizuki H, Omata M.
Journal J Virol Methods
Impact factor1.76
Citation count9
Date of publishing2020 Oct
The second set of primer and probe sequences (NIID-N2) based on the Nucleocapsid gene developed by NIID, used in real-time RT-PCR assay.
PMID 32650037
Title Double-quencher probes improve detection sensitivity toward Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in a reverse-transcription polymerase chain reaction (RT-PCR) assay
Author(s) nameHirotsu Y, Mochizuki H, Omata M.
Journal J Virol Methods
Impact factor1.76
Citation count9
Date of publishing2020 Oct
The first set of primer and probe sequences (NIID-N1) based on the Nucleocapsid gene developed by NIID, used in real-time RT-PCR assay.
PMID 32650037
Title Double-quencher probes improve detection sensitivity toward Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in a reverse-transcription polymerase chain reaction (RT-PCR) assay
Author(s) nameHirotsu Y, Mochizuki H, Omata M.
Journal J Virol Methods
Impact factor1.76
Citation count9
Date of publishing2020 Oct
The second set of primer and probe sequences (CDC-N2) based on the Nucleocapsid gene developed by CDC, used in real-time RT-PCR assay.
PMID 32650037
Title Double-quencher probes improve detection sensitivity toward Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in a reverse-transcription polymerase chain reaction (RT-PCR) assay
Author(s) nameHirotsu Y, Mochizuki H, Omata M.
Journal J Virol Methods
Impact factor1.76
Citation count9
Date of publishing2020 Oct
Probe for a real-time RT-RAA assay specific for the N gene of SARS CoV2.
PMID 32758712
Title A reverse-transcription recombinase-aided amplification assay for the rapid detection of N gene of severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)
Author(s) nameWu T, Ge Y, Zhao K, Zhu X, Chen Y, Wu B, Zhu F, Zhu B, Cui L.
Journal Virology
Impact factor2.819
Citation count4
Date of publishing2020 Oct
The first set of primer and probe sequences (CDC-N1) based on the Nucleocapsid gene developed by CDC, used in real-time RT-PCR assay.
PMID 32650037
Title Double-quencher probes improve detection sensitivity toward Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in a reverse-transcription polymerase chain reaction (RT-PCR) assay
Author(s) nameHirotsu Y, Mochizuki H, Omata M.
Journal J Virol Methods
Impact factor1.76
Citation count9
Date of publishing2020 Oct
The primer and probe sequences of RNAse P (internal positive control) developed by CDC, used in real-time RT-PCR assay.
PMID 32650037
Title Double-quencher probes improve detection sensitivity toward Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in a reverse-transcription polymerase chain reaction (RT-PCR) assay
Author(s) nameHirotsu Y, Mochizuki H, Omata M.
Journal J Virol Methods
Impact factor1.76
Citation count9
Date of publishing2020 Oct